The X-Files: Season 3, Episode 16

3 - 16: Apocrypha (2)

Mulder returns from Hong Kong with Krychek in tow. However, they are attacked by unknown agents and Krychek manages to escape while Mulder finds himself in a hospital. Meanwhile, Skinner is also admitted to the hospital suffering from a gunshot wound fired by a man who is working for the group that wants Scully's sister's murder investigation to end.